 |
Job Description | P62556 | Confidence | 91.88% | Date | Thu Jan 5 12:07:37 GMT 2012 |
Rank | 307 | Aligned Residues | 61 |
% Identity | 11% | Template | c3b9pA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:cg5977-pa, isoform a; |
PDBTitle: spastin
|
Resolution | 2.70 Å |
|
 |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Q | I | N | H | M | R | D | V | F | G | T | R | L | R | R | A | E | . |
. |
. |
. |
. |
D | V | F | P | P | V | I | G | V | A | A | H | K | G | G | V | Y | K | T | S | V | S | V | H | L | A | Q | D | L | A | L | K | G | L | R | V | L | L | V | E | G | N | D | P | Q | G | T |
Query Conservation |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |
|
|   |
|   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|
|   |   |
|
|   |   |
|   |
|
|
|
|
|
|   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
| . |
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | A | K | Q | A | L | Q | E | M | V | I | L | P | S | V | R | P | E | L | F | T | G | L | R | A | P | A | K | G | L | L | L | F | G | . |
P | P | G | N | G | K | T | L | L | A | R | A | V | A | T | E | C | . |
. |
. |
S | A | T | F | L | N | I | S | A | A | S | L | T | S | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |  |  |  |  |  |
| G | G | G | S |
| G | G | G |
|
|
| S |  |  |  |  |  | S | . | S | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | T |
|  |  |  |  |  |  | S | T | T | T | S | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | |
. | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | |
|
|
. | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|