Job Description P62556 Confidence 90.50% Date Thu Jan 5 12:07:37 GMT 2012 Rank 341 Aligned Residues 46 % Identity 9% Template c2zamA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:vacuolar protein sorting-associating protein 4b; PDBTitle: crystal structure of mouse skd1/vps4b apo-form Resolution 3.50 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		E	Q	I	N	H	M	R	D	V	F	G	T	R	L	R	R	A	.	.	.	.	.	E	D	V	F	P	P	V	I	G	V	A	A	H	K	G	G	V	Y	K	T	S	V	S	V	H	L	A	Q	D	L
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.														.
Template Conservation																																					.
Template Sequence		G	A	K	E	A	L	K	E	A	V	I	L	P	I	K	F	P	H	L	F	T	G	K	R	T	P	W	R	G	I	L	L	F	G	P	.	P	G	T	G	K	S	Y	L	A	K	A	V	A	T	E	A
Template Known Secondary structure											T							G	G	G	S		S	S					S							S	.	T	T	S													T
Template Predicted Secondary structure																																					.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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