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Job DescriptionP62556
Confidence99.94%DateThu Jan 5 12:07:37 GMT 2012
Rank26Aligned Residues208
% Identity17%Templatec2wooC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:atpase get3; PDBTitle: nucleotide-free form of s. pombe get3
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110.........120.........130.........140.........150.........160.........170.........180.
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Query Sequence  EDVFPPVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEGNDPQGTASMYHGWVPDLHIHAEDTLLPFYLGEKDDVTY
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Template Sequence  EQTSLKWI. FVGGKGGVGKTTTSCSLAIQMSKVRSSVLLIST. DPAHNLSDAFGTKFGKDARKVPGFDNLSAM. EIDPNL
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   15....20.. .......30.........40.........50..... ....60.........70.........80..... ....90.
 
   182.......190.........200.........210.........220.........230. ........240.........250....
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Query Sequence  AIKPTCWPGLDIIPSCLALHRIETELMGKFDEGKLPTDPHLMLRLAIETV. AHDYDVIVIDSAPNLGIGTINVV. . . . . .
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Template Sequence  SIQEMTEQALSGMMQD. . . . . . . . . . . . . LAFTIPGIDEALAFAEILKQIKSMEFDCVIFDTAPTGHTLRFLNFPTVLEK
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TTTGGG
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   92.......100....... ..110.........120.........130.........140.........150........
 
   255....260.........270.........280.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . CAADVLIVPTPAELFDYTSALQFFDMLRDLLKN
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Template Sequence  ALGKLGGLSSRFGPMINQMGSIMGQDLFGKMESMRANISEVNKQFKNPDLTTFVCVCISEFLSLYETERMIQELTSY. . .
Template Known Secondary structure  TS
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   167..170.........180.........190.........200.........210.........220.........230.........240...
 
   288.290.........300......... 310.........320.........330....
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Query Sequence  VDLKGFEPDVRILLTKYSNSNG. . . . . . . . . . SQSPWMEEQIRDAWGSMVLKNVVRE
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Template Sequence  . . . . . EIDTHNIVVNQLLLDPNTTCPQCMARRKMQQKYLAQIEELYEDFHV. VKVPQ
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   249250.........260.........270.........280.........290.... .....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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