Job Description P62556 Confidence 96.84% Date Thu Jan 5 12:07:37 GMT 2012 Rank 80 Aligned Residues 52 % Identity 15% Template c2vz4A_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional activator tipa; PDBTitle: the n-terminal domain of merr-like protein tipal bound to2 promoter dna Resolution 2.90 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	W	R	I	G	E	A	A	D	L	V	G	V	S	S	Q	A	I	R	D	A	E	K	A	G	R	L	P	H	P	D	M	E	I	R	G	R	V	E	Q	R	V	G	Y	T	I	E	Q	I	N	H	M	R	D	V	F
Query Conservation
Alig confidence																																						.	.	.	.
Template Conservation																																						.	.	.	.
Template Sequence		S	Y	S	V	G	Q	V	A	G	F	A	G	V	T	V	R	T	L	H	H	Y	D	D	I	G	L	L	V	P	S	E	R	S	H	A	G	.	.	.	.	H	R	R	Y	S	D	A	D	L	D	R	L	Q	Q	I	L
Template Known Secondary structure			B										T													T	S	S			S				S	S		.	.	.	.				B
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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