 |
Job Description | P62556 | Confidence | 96.24% | Date | Thu Jan 5 12:07:37 GMT 2012 |
Rank | 117 | Aligned Residues | 46 |
% Identity | 11% | Template | c2qbyB_ |
PDB info |
PDB header:replication/dna | Chain: B: PDB Molecule:cell division control protein 6 homolog 3; |
PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus)
|
Resolution | 3.35 Å |
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Q | I | N | H | M | R | D | V | F | G | T | R | L | R | R | A | E | D | V | F | P | P | V | I | G | V | A | A | H | K | G | G | V | Y | K | T | S | V | S | V | H | L | A | Q | D | L | A | L | K |
Query Conservation |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |   |
|   |   |   | . | . | . |   |   |   |   |   |   |   |   |
|
|
|   |
| . |   |   |
|
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
D | I | L | R | D | A | A | I | A | I | R | Y | F | . |
. |
. |
V | K | N | E | V | K | F | S | N | L | F | L | G | . |
L | T | G | T | G | K | T | F | V | S | K | Y | I | F | N | E | I | E | E | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  | T | T |
|
|
|
|  |  |  |  |  |  | . |
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |
|
|
|
|
|  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|