Job Description P62556 Confidence 100.00% Date Thu Jan 5 12:07:37 GMT 2012 Rank 3 Aligned Residues 278 % Identity 19% Template c2ozeA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:orf delta'; PDBTitle: the crystal structure of delta protein of psm19035 from2 streptoccocus pyogenes Resolution 1.83 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	I	N	H	M	R	D	V	F	G	T	R	L	R	R	A	E	D	V	F	P	P	V	I	G	V	A	A	H	K	G	G	V	Y	K	T	S	V	S	V	H	L	A	Q	D	L	A	L	K	G	L	R	V	L	L	V	E	G	N	D	P	Q	G	T	A	S	M	Y	H	G	W	V	P	D	L	H	I	H	A
Query Conservation
Alig confidence																	.	.	.																																										.
Template Conservation																	.	.	.																																										.
Template Sequence		E	E	L	K	I	L	E	E	L	R	R	I	L	S	N	.	.	.	K	N	E	A	I	V	I	L	N	N	Y	F	K	G	G	V	G	K	S	K	L	S	T	M	F	A	Y	L	T	D	K	L	N	L	K	V	L	M	I	D	K	.	D	L	Q	A	T	L	T	K	D	L	A	K	T	F	K	V	E	L	P	R
Template Known Secondary structure																	.	.	.			S									S	S	S	S	S	S															T	T									.		T	T								T	T	T	S						S
Template Predicted Secondary structure																	.	.	.																																										.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	T	L	L	P	F	Y	L	G	E	K	D	D	V	T	Y	A	I	K	P	T	C	W	P	G	L	D	I	I	P	S	C	L	A	L	H	R	I	E	T	E	L	M	G	K	F	D	E	G	K	L	P	T	D	P	H	L	M	L	R	L	A	I	E	T	V	A	H	D	Y	D	V	I	V	I	D	S	A	P
Query Conservation
Alig confidence																.	.	.	.																										.	.	.	.	.
Template Conservation																.	.	.	.																										.	.	.	.	.
Template Sequence		V	N	F	Y	E	G	L	K	N	G	N	L	A	S	.	.	.	.	S	I	V	H	L	T	D	N	L	D	L	I	P	G	T	F	D	L	M	L	L	P	K	L	T	.	.	.	.	.	R	S	W	T	F	E	N	E	S	R	L	L	A	T	L	L	A	P	L	K	S	D	Y	D	L	I	I	I	D	T	V	P
Template Known Secondary structure		S									T			G	G	.	.	.	.	G				S	S	S	S								G	G	G	G	G					T	.	.	.	.	.	T	T	S							T							G	G	G	G	G	G		S								S
Template Predicted Secondary structure																.	.	.	.																										.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	G	I	G	T	I	N	V	V	C	A	A	D	V	L	I	V	P	T	P	A	E	L	F	D	Y	T	S	A	L	Q	F	F	D	M	L	R	D	L	L	K	N	V	D	L	K	G	F	E	P	D	V	R	I	L	L	T	K	Y	S	N	S	N	G	S	Q	S	P	W	M	E	E	Q	I	R	D	A	W	G
Query Conservation
Alig confidence																																															.	.																											.
Template Conservation																																															.	.																											.
Template Sequence		T	P	S	V	Y	T	N	N	A	I	V	A	S	D	Y	V	M	I	P	L	Q	A	E	E	E	S	T	N	N	I	Q	N	Y	I	S	Y	L	I	D	L	Q	E	Q	F	N	.	.	P	G	L	D	M	I	G	F	V	P	Y	L	V	D	T	D	S	A	T	I	K	S	N	L	E	E	.	L	Y	K	Q	H	K
Template Known Secondary structure		S		S											S								G	G	G																						.	.	T	T											S		T	T											.					T	T
Template Predicted Secondary structure																																															.	.																											.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.
		325	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		S	M	.	.	V	L	K	N	V	V	R	E	T	D	E	V	G	K	G	Q	I	R	M	R	T	V	F	E	Q	A	I	D	Q	R	S	S	T	G	A	W	R	N	A	L	S	I	W	E	P	V	C	N	E	I	F	D	R	L	I	K	P	R	W	E	I	R
Query Conservation				.	.
Alig confidence				.	.																												.	.	.	.	.	.	.	.	.																					.
Template Conservation																																	.	.	.	.	.	.	.	.	.																					.
Template Sequence		E	D	N	L	V	F	Q	N	I	I	K	R	S	N	K	V	S	T	W	S	K	N	G	I	T	E	H	K	G	Y	D	.	.	.	.	.	.	.	.	.	K	K	V	L	S	M	Y	K	N	V	F	F	E	M	L	E	R	I	I	Q	.	L	E	N	E	K
Template Known Secondary structure		T	T			B		S	S																		S	S	S	T	T		.	.	.	.	.	.	.	.	.																					.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.										.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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