Return to main results Retrieve Phyre Job Id

Job DescriptionP62556
Confidence95.85%DateThu Jan 5 12:07:37 GMT 2012
Rank133Aligned Residues54
% Identity22%Templatec2jmlA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:dna binding domain/transcriptional regulator; PDBTitle: solution structure of the n-terminal domain of cara repressor
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90.....
Predicted Secondary structure 























Query SS confidence 
























































Query Sequence  RWRIGEAADLVGVSSQAIRDAEKAGRLPHPDMEIRGRVEQRVGYTIEQINHMRDVFG
Query Conservation         
 


     
         
                  
    

    
Alig confidence 



































...

















Template Conservation    

 


   


  


 

    
  
      ...
 
 
   

  
  
  
Template Sequence  TLRIRTIARMTGIREATLRAWERRYGFPRPLRSEGN. . . NYRVYSREEVEAVRRVAR
Template Known Secondary structure 
TTSTTT

S

BSSS
S...SS

Template Predicted Secondary structure 














...


Template SS confidence 
























































   2.......10.........20.........30....... ..40.........50.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions