Job Description P62556 Confidence 100.00% Date Thu Jan 5 12:07:37 GMT 2012 Rank 5 Aligned Residues 242 % Identity 26% Template c2bekB_ PDB info PDB header:chromosome segregation Chain: B: PDB Molecule:segregation protein; PDBTitle: structure of the bacterial chromosome segregation protein2 soj Resolution 1.8 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	P	V	I	G	V	A	A	H	K	G	G	V	Y	K	T	S	V	S	V	H	L	A	Q	D	L	A	L	K	G	L	R	V	L	L	V	E	G	N	D	P	Q	G	T	A	S	M	Y	H	G	W	V	P	D	L	H	I	H	A	E	D	T	L	L	P	F	Y	L	G	E	K	D	D	V	T	Y	A	I	K
Query Conservation
Alig confidence																																									.																					.	.	.	.	.	.	.												.	.
Template Conservation																																									.																					.	.	.	.	.	.	.												.	.
Template Sequence		K	V	R	R	I	A	L	A	N	Q	K	G	G	V	G	K	T	T	T	A	I	N	L	A	A	Y	L	A	R	L	G	K	R	V	L	L	V	D	L	.	A	P	Q	G	N	A	T	S	G	L	G	V	R	A	E	R	G	V	Y	H	.	.	.	.	.	.	.	L	L	Q	G	E	P	L	E	G	L	V	.	.
Template Known Secondary structure											S	S	S	S	S	S														T	T	T									.		T	T							T	T				S	S	S				.	.	.	.	.	.	.			T	T			G	G	G	T		.	.
Template Predicted Secondary structure																																									.																					.	.	.	.	.	.	.												.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.								.	.	.	.	.	.	70	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	C	W	P	G	L	D	I	I	P	S	C	L	A	L	H	R	I	E	T	E	L	M	G	K	F	D	E	G	K	L	P	T	D	P	H	L	M	L	R	L	A	I	E	T	V	A	H	D	Y	D	V	I	V	I	D	S	A	P	N	L	G	I	G	T	I	N	V	V	C	A	A	D	V	L	I	V	P	T
Query Conservation
Alig confidence		.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	H	P	V	D	G	F	H	L	L	P	A	T	P	D	L	V	G	A	T	V	E	L	A	G	A	P	.	.	.	.	.	.	.	.	.	.	.	.	T	A	L	R	E	A	L	R	D	E	G	Y	D	L	V	L	L	D	A	P	P	S	L	S	P	L	T	L	N	A	L	A	A	A	E	G	V	V	V	P	V
Template Known Secondary structure		.				T	T								T	T								T	T	T		T	.	.	.	.	.	.	.	.	.	.	.	.	T									T	T		S								S	S		S											S
Template Predicted Secondary structure		.																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100													.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	E	L	F	D	Y	T	S	A	L	Q	F	F	D	M	L	R	D	L	L	K	N	V	D	L	K	G	F	E	P	D	V	R	I	L	L	T	K	Y	S	N	S	N	G	S	Q	S	P	W	M	E	E	Q	I	R	D	A	W	G	S	M	V	L	K	N	V	V	R	E	T	D	E	V	G	K	G	Q	I	R
Query Conservation
Alig confidence																															.	.																			.
Template Conservation																															.	.																			.
Template Sequence		Q	A	E	Y	Y	A	L	E	G	V	A	G	L	L	A	T	L	E	E	V	R	A	G	L	N	P	R	L	R	.	.	L	L	G	I	L	V	T	M	Y	D	G	R	T	L	L	A	Q	Q	.	V	E	A	Q	L	R	A	H	F	G	E	K	V	F	W	T	V	I	P	R	N	V	R	L	A	E	A	P	S	F
Template Known Secondary structure			S	S																				T	T		T	T			.	.								S	B		T	T	S						.										G	G	G	B		S				B								G	G	G	G
Template Predicted Secondary structure																															.	.																			.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	T	V	F	E	Q	A	I	D	Q	R	S	S	T	G	A	W	R	N	A	L	S	I	W	E	P	V	C	N	E	I	F	D	R	L
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.
Template Sequence		G	K	T	I	A	Q	H	A	P	T	S	.	.	.	.	.	.	.	.	P	G	A	H	A	Y	R	R	L	A	E	E	V	M	A	R	V
Template Known Secondary structure		T								T	T	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.									230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions