Job Description P62556 Confidence 99.55% Date Thu Jan 5 12:07:37 GMT 2012 Rank 38 Aligned Residues 228 % Identity 21% Template c1vmaA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:cell division protein ftsy; PDBTitle: crystal structure of cell division protein ftsy (tm0570) from2 thermotoga maritima at 1.60 a resolution Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.
Query SS confidence																																																			.	.	.
Query Sequence		M	K	L	M	E	T	L	N	Q	C	I	N	A	G	H	E	M	T	K	A	I	A	I	A	Q	F	N	D	D	S	P	E	A	R	K	I	T	R	R	W	R	I	G	E	A	A	D	L	V	.	.	.	G	V	S	S	Q	A	I	R	D	A	E	K	A	G	R	L	P	H	P	D	M	E	I	R	G	R	V	E
Query Conservation																																																			.	.	.
Alig confidence																																				.	.	.	.	.	.										.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	G	L	F	D	F	L	K	K	G	L	Q	K	T	K	E	T	F	F	G	R	V	V	K	L	L	K	G	K	K	L	D	D	E	.	.	.	.	.	.	T	R	E	E	L	E	E	L	L	I	Q	A	D	V	G	V	E	T	T	E	Y	I	L	E	R	L	E	E	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.																	T									T	T							.	.	.	.	.	.												T	T														T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.							.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																									.	.	.	.	.
Query SS confidence																									.	.	.	.	.
Query Sequence		Q	R	V	G	Y	T	I	E	Q	I	N	H	M	R	D	V	F	G	T	R	L	R	R	.	.	.	.	.	A	E	D	V	F	P	P	V	I	G	V	A	A	H	K	G	G	V	Y	K	T	S	V	S	V	H	L	A	Q	D	L	A	L	K	G	L	R	V	L	L	V	E	G	N	D	P	Q	G	T	A	S	M
Query Conservation																									.	.	.	.	.
Alig confidence		.	.	.	.																				.	.	.	.	.															.
Template Conservation		.	.	.	.																																							.
Template Sequence		.	.	.	.	K	D	G	D	A	L	E	S	L	K	E	I	I	L	E	I	L	N	F	D	T	K	L	N	V	P	P	E	P	P	F	V	I	M	V	V	G	V	.	N	G	T	G	K	T	T	S	C	G	K	L	A	K	M	F	V	D	E	G	K	S	V	V	L	A	A	A	D	T	F	R	A	A	A	I	E
Template Known Secondary structure		.	.	.	.			S														T		S								S	S	S										.	T	T	S	S															T	T										T	T
Template Predicted Secondary structure		.	.	.	.																																							.
Template SS confidence
						63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	G	W	V	P	D	L	H	I	H	A	E	D	T	L	L	P	F	Y	L	G	E	K	D	D	V	T	Y	A	I	K	P	T	C	W	P	G	L	D	I	I	P	S	C	L	A	L	H	R	I	E	T	E	L	M	G	K	F	D	E	G	K	L	P	T	D	P	H	L	M	L	R	L	A	I	E	T	V	A
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	W	G	E	R	V	G	A	T	V	I	S	H	S	E	G	A	D	P	A	A	V	A	F	D	A	V	A	H	A	L
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T							S	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.																																															140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
			233	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.													.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure		.													.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.													.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	H	D	Y	D	V	I	V	I	D	S	A	P	.	.	N	L	G	I	G	T	I	N	V	V	C	A	.	.	.	.	.	.	.	.	.	.	.	.	A	D	V	L	I	V	P	T	P	A	E	L	F	D	Y	T	S	A	L	Q	F	F	D	M	L	R	D	L	L	K	N	V	D	L	K	G	F	E	P	D	V
Query Conservation		.													.	.													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.													.	.													.	.	.	.	.	.	.	.	.	.	.	.											.																		.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	N	K	D	V	V	I	I	D	T	A	G	R	L	H	T	K	K	N	L	M	E	E	L	R	K	V	H	R	V	V	K	K	K	I	P	D	A	P	H	E	T	L	L	V	I	D	A	.	T	T	G	Q	N	G	L	V	Q	A	K	I	F	K	E	A	V	.	.	.	.	.	.	.	.	.	.	N	V	T
Template Known Secondary structure			T	T		S											S																G	G	G	T		T	T			S								G	.	G	G															S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.											.	.	240
		298	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	L	L	T	K	Y	S	N	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	I	L	T	K	L	D	G	T	A
Template Known Secondary structure								G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions