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Job Description | P62556 | Confidence | 84.27% | Date | Thu Jan 5 12:07:37 GMT 2012 |
Rank | 428 | Aligned Residues | 83 |
% Identity | 13% | Template | c1mj1A_ |
PDB info |
PDB header:ribosome | Chain: A: PDB Molecule:elongation factor tu; |
PDBTitle: fitting the ternary complex of ef-tu/trna/gtp and ribosomal proteins2 into a 13 a cryo-em map of the coli 70s ribosome
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Resolution | 13.00 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
H | D | Y | D | V | I | V | I | D | S | A | P | N | L | G | . |
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I | G | T | I | N | V | V | C | A | A | D | V | L | I | V | P | T | P | A | E | L | F | D | Y | T | S | A | L | Q | F | F | D | M | L | R | D | L | L | K | N | V | D | L | K | G | F | E | P | D | V | R | I | L | L | T | K | Y | S | N | S | N | G | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | K | R | H | Y | S | H | V | D | C | R | G | H | A | D | Y | I | K | N | M | I | T | G | A | A | Q | M | D | G | A | I | L | V | V | S | A | A | D | G | R | M | R | Q | T | R | E | H | I | L | L | A | R | Q | V | . |
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G | V | R | Y | I | V | V | F | M | N | K | V | D | M | V | D | D | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
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311 | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Q | S | . |
P | W | M | E | E | Q | I | R | D | A | W |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | L | L | D | L | V | E | M | E | V | R | D | L | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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