Return to main results Retrieve Phyre Job Id

Job DescriptionP62556
Confidence94.76%DateThu Jan 5 12:07:37 GMT 2012
Rank193Aligned Residues47
% Identity23%Templatec1e8cB_
PDB info PDB header:ligaseChain: B: PDB Molecule:udp-n-acetylmuramoylalanyl-d-glutamate--2,6- PDBTitle: structure of mure the udp-n-acetylmuramyl tripeptide2 synthetase from e. coli
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110.........120.........130.........140.
Predicted Secondary structure 


















Query SS confidence 

















































Query Sequence  DVFGTRLRRAEDVFPPVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLV
Query Conservation                  

 
 
 







 
 


  

  
 




Alig confidence 





















...
























Template Conservation    

      
     

 


...






  

  

   
   
  
Template Sequence  SALAGRFYHEPSDNLRLVGVTG. . . TNGKTTTTQLLAQWSQLLGEISAVX
Template Known Secondary structure  TT
GGGSSS...SS
TT

Template Predicted Secondary structure 





...








Template SS confidence 

















































   94.....100.........110..... ....120.........130.........140
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions