Job Description P76168 Confidence 99.44% Date Thu Jan 5 12:20:01 GMT 2012 Rank 18 Aligned Residues 103 % Identity 14% Template c3lysC_ PDB info PDB header:recombination Chain: C: PDB Molecule:prophage pi2 protein 01, integrase; PDBTitle: crystal structure of the n-terminal domain of the prophage2 pi2 protein 01 (integrase) from lactococcus lactis,3 northeast structural genomics consortium target kr124f Resolution 2.80 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		R	Q	D	L	T	I	K	E	L	A	E	K	F	L	A	L	.	K	E	T	E	V	A	K	T	S	L	N	T	Y	R	A	V	I	K	N	I	L	S	I	I	G	E	K	N	L	A	S	S	I	N	K	E	K	L	L	E	V	R	K	E	L	L	T	G	Y	Q	I	P	K	S	N	Y	I	V	T	Q	P	G	R
Query Conservation																		.
Alig confidence																		.																									.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	K	Q	E	I	S	E	Y	F	K	D	W	X	E	L	Y	K	K	N	A	I	D	E	X	T	Y	K	G	Y	E	Q	T	L	K	Y	L	K	T	Y	X	.	P	N	V	L	I	S	E	I	T	A	S	S	Y	Q	R	A	L	N	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	T	H
Template Known Secondary structure					S	B													T	T	T	T	S																			S	.	S	S		B	T	T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S
Template Predicted Secondary structure																																											.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.															.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	V	T	V	N	N	Y	M	T	N	L	N	A	V	F	Q	F	G	V	D	N	G	Y	L	A	D	N	P	F	K	G	I	S	P	L	K	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	A	S	T	K	G	F	H	T	R	V	R	A	S	I	Q	C	L	I	E	E	G	R	L	Q	K	D	F	T	T	R	A	V	V	K	G	L	E
Template Known Secondary structure																								T		S	S	S		S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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