Job Description P76168 Confidence 28.48% Date Thu Jan 5 12:20:01 GMT 2012 Rank 32 Aligned Residues 138 % Identity 10% Template c2f4qA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:type i topoisomerase, putative; PDBTitle: crystal structure of deinococcus radiodurans topoisomerase ib Resolution 1.75 Å

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		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	Y	T	G	V	R	P	G	E	L	C	A	L	G	W	E	D	I	D	L	K	N	G	T	M	M	I	R	R	N	L	A	K	D	R	F	T	V	P	K	T	Q	A	G	T	N	R	V	I	H	L	I	K	P	A	I	D	A	L	R	S	Q	M	T	L	T	R	L	S	K	E	H	I	I	D	V	H	F	R
Query Conservation
Alig confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	X	A	L	X	T	R	L	L	H	V	A	R	F	R	V	T	Y	G	L	S	T	L	R	Q	R	H	V	V	V	D	G	N	T	V	T	F	R	F	K	G	K	H	G	V	S	Q	H	K	A	T	S	D	R	T	L	A	A	N	X	Q	K	L	L	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																					G	G	G		B	G	G	G					T	T									G	G	G																					T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.				290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																													.	.	.																																											.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.																																											.	.	.	.	.	.	.	.
Query Sequence		E	Y	G	R	T	E	K	Q	K	C	T	F	V	F	Q	P	E	V	S	A	R	V	K	N	Y	G	D	.	.	.	H	F	T	V	D	S	I	R	Q	M	W	D	A	A	I	K	R	A	G	L	R	H	R	K	S	Y	Q	S	R	H	T	Y	A	C	W	S	L	T	A	G	A	N	.	.	.	.	.	.	.	.
Query Conservation																													.	.	.																																											.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.																.	.	.		.	.																						.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.		.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	P	W	L	F	Q	T	V	D	A	G	G	G	E	R	R	R	I	H	S	T	E	L	N	A	Y	L	R	E	V	I	.	.	.	G	.	.	P	F	T	A	K	D	F	R	T	W	G	G	T	L	L	A	A	E	Y	L	A	Q	Q	G	T	E	S	S	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	B	S	S					S	S	S	S																			.	.	.	T	.	.	T	S																									S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.		.	.
Template SS confidence
															199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
												332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	P	A	F	I	A	N	Q	M	G	H	A	D	A	Q	M	V	F	Q	V	Y	G	K
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.											.
Template Conservation																						.
Template Sequence		R	Q	A	K	K	V	L	V	D	C	V	K	F	V	A	D	D	L	G	N	.	T	P	A	V	T	R	G	S	Y	I	C
Template Known Secondary structure																				T		.									T	S
Template Predicted Secondary structure																						.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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