Job Description P76168 Confidence 18.64% Date Thu Jan 5 12:20:01 GMT 2012 Rank 40 Aligned Residues 97 % Identity 8% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	F	P	S	S	R	N	L	E	K	F	G	E	A	R	Q	D	L	T	I	K	E	L	A	E	K	F	L	A	L	K	E	T	E	V	A	K	T	S	L	N	T	Y	R	A	V	I	K	N	I	L	S	I	I	G	E	K	N	L	A	S	S	I	N	K	E	K	L	L	E	V	R	K	E	L	L	T	G	Y
Query Conservation
Alig confidence																														.	.	.	.	.	.																											.
Template Conservation																														.	.	.	.	.	.																											.
Template Sequence		S	A	L	S	D	T	E	R	A	Q	L	D	V	M	K	L	L	N	V	S	L	H	E	M	S	R	K	I	.	.	.	.	.	.	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	.	K	A	L	S	V	R	D	E	R	N	V	I	R	A	A	S	N	S	C
Template Known Secondary structure																		T	T											.	.	.	.	.	.	T												S	G	G	G	T	T									.		S	S
Template Predicted Secondary structure																														.	.	.	.	.	.																											.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.							.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	P	K	S	N	Y	I	V	T	Q	P	G	R	S	A	V	T	V	N	N	Y	M	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	A	R	D	I	R	N	E	L	Q	L	S	A	S	K	R	T	I	L	N	V	I	K
Template Known Secondary structure											T	T			S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions