Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEC8
Confidence99.78%DateThu Jan 5 11:23:02 GMT 2012
Rank23Aligned Residues147
% Identity17%Templatec3gieA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sensor histidine kinase desk; PDBTitle: crystal structure of deskc_h188e in complex with amp-pcp
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   362.......370.........380.........390.........400.........410.........420.........430.........440.
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  LHLKSYKQLEDYILKTANNYQEEIGSLLGKIKSPVIAGFLISKINRATDLGHTLILNSESQLPDSGSEDQVATLITTLGN
Query Conservation              
                      
                   
          
  
   
 


 
Alig confidence 


































































.











Template Conservation                                            
                     
  .     
      
Template Sequence  LIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMRLKDELINIKQILEAADIMFIYEEEKWPENISL. LNENILSMCLKE
Template Known Secondary structure  TTT


T







SS

.
Template Predicted Secondary structure 


























.
Template SS confidence 















































































   208.210.........220.........230.........240.........250.........260.........270.... .....280......
 
   442.......450.........460.........470.........480.........490.........500.........510.........520.
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  LIENALEALGPEPGGEISVTLHYRHGWLHCEVNDDGPGIAPDKIDHIFDKGVSTKGSERGVGLALVKQQVENLGGSIAVE
Query Conservation 

 



       
 
 
        
 
 
 


 

  
 
  


 
 
 
  





 

  

    
 
 
 
Alig confidence 







...


























.....................




















Template Conservation     
    ...     
 
          
 
 


 
.....................



          

 
 
 
Template Sequence  AVTNVVKH. . . SQAKTCRVDIQQLWKEVVITVSDDGTF. . . . . . . . . . . . . . . . . . . . . KGGLLGMRERLEFANGSLHID
Template Known Secondary structure  T...T

STT
S

.....................


TTT
Template Predicted Secondary structure 
...














.....................




Template SS confidence 















































































   290....... ..300.........310.........320.... .....330.........340.....
 
   522.......530.....
Predicted Secondary structure 



Query SS confidence 













Query Sequence  SEPGIFTQFFVQIP
Query Conservation 
  
 

 
 
 

Alig confidence 
..










Template Conservation 
..  

   
 

Template Sequence  T. . ENGTKLTMAIP
Template Known Secondary structure  T..TSS
Template Predicted Secondary structure 
..



Template SS confidence 













   355 ....360......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions