Job Description P0AEC8 Confidence 56.73% Date Thu Jan 5 11:23:02 GMT 2012 Rank 112 Aligned Residues 57 % Identity 7% Template c3f1oB_ PDB info PDB header:transcription Chain: B: PDB Molecule:aryl hydrocarbon receptor nuclear translocator; PDBTitle: crystal structure of the high affinity heterodimer of hif22 alpha and arnt c-terminal pas domains, with an internally-3 bound artificial ligand Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	S	I	K	E	G	V	V	A	V	D	D	R	G	E	V	T	L	I	N	D	A	A	Q	E	L	L	N	Y	R	K	S	Q	D	D	E	K	L	S	T	L	S	H	S	W	S	Q	V	V	D	V	S	E	V	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	C	Q	P	T	R	F	I	S	R	H	N	I	E	G	I	F	T	F	V	D	H	R	C	V	A	T	V	G	Y	Q	P	Q	E	L	L	G	K	N	I	V	E	F	C	H	P	E	D	Q	Q	L	L	R	D	S	F	Q
Template Known Secondary structure														T	T		B						T	T						S			G	G	G	T	T	T	S	B	G	G	G	G	B		T	T	T
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions