Job Description P0AEC8 Confidence 70.87% Date Thu Jan 5 11:23:02 GMT 2012 Rank 107 Aligned Residues 155 % Identity 10% Template c3by9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the v. cholerae histidine kinase dctb2 sensor domain Resolution 1.70 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.											.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																					.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.																					.	.	.
Query Sequence		I	Y	F	S	Q	I	S	D	M	T	R	D	G	L	A	N	K	A	L	A	.	.	.	.	.	.	.	.	.	.	V	A	R	T	L	A	D	S	P	E	I	R	Q	G	L	Q	K	K	P	Q	.	.	.	E	S	G	I	Q	A	I	A	E	A	V	R	K	R	N	D	L	L	F	I	V	V	T	D	M	Q	S
Query Conservation																						.	.	.	.	.	.	.	.	.	.																					.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation
Template Sequence		F	Q	Y	Q	A	L	L	N	E	H	Q	S	Q	L	D	R	F	S	S	H	I	V	A	T	L	D	K	Y	A	H	I	P	H	L	I	S	K	D	K	E	L	V	D	A	L	L	S	A	Q	N	S	A	Q	I	D	I	T	N	R	Y	L	E	Q	V	N	E	V	I	Q	A	A	D	T	Y	L	I	D	R	F	G
Template Known Secondary structure		G	G																								T	T	T	T	T							T										T	T	T																				T		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.							.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.
Query Sequence		L	R	Y	S	H	P	E	A	Q	R	I	G	Q	P	F	K	G	D	D	I	L	.	.	.	.	.	.	K	A	L	N	G	E	E	N	V	A	I	N	R	G	F	L	A	Q	A	L	R	V	F	T	P	I	Y	D	E	N	H	K	Q	I	G	V	V	A	I	G	L	E	L	S	R	V	T	Q	Q	I	N	D	S
Query Conservation																							.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.
Template Conservation
Template Sequence		N	T	I	A	S	S	N	W	N	L	D	R	S	F	I	G	R	N	F	A	W	R	P	Y	F	Y	L	S	I	A	G	Q	K	S	Q	Y	F	A	L	G	S	T	S	G	Q	R	G	Y	Y	Y	A	Y	P	V	I	Y	A	A	E	I	L	G	V	I	V	V	K	X	D	L	S	A	I	E	Q	G	W	Q	N	K
Template Known Secondary structure		B					T	T	T	T	S	T	T			T	T		B		T	T	S							T	T	T	S									T	T	T														T	T												S						T				S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	W	S	I	I	W	S	V	L	F	G	M	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	Y	F	V	A	T	D	D	H	Q	V	V	F
Template Known Secondary structure		S								T	T		B
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions