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Job DescriptionP0AEC8
Confidence100.00%DateThu Jan 5 11:23:02 GMT 2012
Rank4Aligned Residues308
% Identity15%Templatec3a0rA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of histidine kinase thka (tm1359) in complex with2 response regulator protein trra (tm1360)
Resolution3.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   224.....230.........240.........250.........260. ........270.........280.........290.........300..
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Query Sequence  RQAMLQSIKEGVVAVDDRGEVTLINDAAQELLNYRKSQ. DDEKLSTLSHSWSQVVDVSEVLRDGTPRRDEEITIKDRLLL
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Template Sequence  SESILESLETAIITLSKDGRITEWNKKAEQLFGLKKENVLGRRLKDLPDFEEIGSVAESVFENKEPVFLNFYKFGERYFN
Template Known Secondary structure 

SSGGGSSSSSSB
S
B
S

STTTTT
BSTTSTTTT






BTTB

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   416...420.........430.........440.........450.........460.........470.........480.........490.....
 
   303......310.........320.........330.........340.. .......350.........360..
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Query Sequence  INTVPVRSNGVIIGAISTFRDKTEVRKLMQRLDGLVNYAD. . . . . . . . . . . . . . . . . . . . ALRERSHEFMNKLHVILGLL
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Template Sequence  IRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERKRRERLSILGEMTARVAHEIRNPITIIGGFIMRMKKHLDDPETLKK
Template Known Secondary structure 

TTTTSS


STTTTTTTTTTTTS
S
SS
TT
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   496...500.........510.........520.........530.........540.........550.........560.........570.....
 
   363......370.........380.........390.........400.........410 .........420.........430.........440
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Query Sequence  HLKSYKQLEDYILKTANNYQEEIGSLLGKIKSPVIAGFLISKINRATD. . LGHTLILNSESQLPDSGSEDQVATLITTLG
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Template Sequence  YINIITNELSRLETIVKEILEYSKERVLEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLI
Template Known Secondary structure 


TTTT


S
S


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   576...580.........590.........600.........610.........620.........630.........640.........650.....
 
   441........450.........460.........470.........480.........490.........500.........510.. .......
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Query Sequence  NLIENALEALGPEPGGEISVTLHYRHGWLHCEVNDDGPGIAPDKIDHIFDKGVSTKGSERGVGLALVKQQVE. NLGGSIA
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Template Sequence  NLVQNAIEAT. . GENGKIKITSEDMYTKVRVSVWNSGPPIPEELKEKIFSPFF. . . . . . TTLGLSICRKIIEDEHGGKIW
Template Known Secondary structure  TTT..
TT

TTS



GGGGTTTSSS

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TTT
SB

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   657..660...... ...670.........680.........690.........700....... ..710.........720........
 
   520.........530.........540
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Query Sequence  VESEPGIFTQFFVQIPWDGER
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Template Sequence  TENR. ENGVVFIFEIPKTPEK
Template Known Secondary structure 
.SSS
TT
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   735... .740.........750....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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