Job Description P0AEC8 Confidence 99.64% Date Thu Jan 5 11:23:02 GMT 2012 Rank 28 Aligned Residues 108 % Identity 21% Template c2q2eB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei Resolution 4.00 Å

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		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.		.	.	.	.	.	460	.	.	.	.	.	.		.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.						.	.	.	500	.	.	.	.	.	.	.
Predicted Secondary structure																						.													.																															.	.	.	.	.
Query SS confidence																						.													.																															.	.	.	.	.
Query Sequence		L	I	T	T	L	G	N	L	I	E	N	A	L	E	A	L	G	P	E	P	.	G	G	E	I	S	V	T	L	H	Y	R	H	.	G	W	L	H	C	E	V	N	D	D	G	P	G	I	A	P	D	K	I	D	H	I	F	D	K	G	V	S	T	K	.	.	.	.	.	G	S	E	R	G	V	G	L	A	L	V
Query Conservation																						.													.																															.	.	.	.	.
Alig confidence																						.													.																															.	.	.	.	.
Template Conservation
Template Sequence		L	I	T	T	V	K	E	A	V	D	N	A	L	D	A	C	E	E	A	G	I	L	P	D	I	L	V	Q	V	E	R	T	G	P	D	Y	V	T	V	I	I	E	D	N	G	P	G	I	V	R	E	Q	I	P	K	V	F	A	K	L	L	Y	G	F	H	A	L	K	S	R	G	Q	Q	G	I	G	I	S	A	A
Template Known Secondary structure																		T	T	T	S		S											T	T	T										S					G	G	G						S													S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		508	.	510	.	.	.	.	.	.	.		.	.	520	.	.	.		.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure												.							.
Query SS confidence												.							.
Query Sequence		K	Q	Q	V	E	N	L	G	G	S	.	I	A	V	E	S	E	.	P	G	I	F	T	Q	F	F	V	Q	I	P	W	D	G	E	R	S	N
Query Conservation												.							.
Alig confidence												.							.
Template Conservation
Template Sequence		V	L	Y	A	Q	M	T	A	G	R	H	T	K	I	L	S	K	T	S	P	T	A	P	A	H	Y	Y	E	L	M	I	N	T	S	T	N	E
Template Known Secondary structure									T											S	S	S	S											S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions