Job Description P0AEC8 Confidence 33.86% Date Thu Jan 5 11:23:02 GMT 2012 Rank 119 Aligned Residues 70 % Identity 9% Template c2kdkA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:aryl hydrocarbon receptor nuclear translocator-like protein PDBTitle: structure of human circadian clock protein bmal2 c-terminal pas domain Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	G	V	V	A	V	D	D	R	G	E	V	T	L	I	N	D	A	A	Q	E	L	L	N	Y	R	K	S	Q	D	D	E	K	L	S	T	L	S	H	S	W	S	Q	V	V	D	V	S	E	V	L	R	D	G	T	P	R	R	D	E	E	I	T	I	K	D	R	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	F	I	T	R	F	A	V	N	G	K	F	V	Y	V	D	Q	R	A	T	A	I	L	G	Y	L	P	Q	E	L	L	G	T	S	C	Y	E	Y	F	H	Q	D	D	H	N	N	L	T	D	K	H	K	A	V	L	Q	S	K	E	K	I	L	T	D	S	Y	K	F	R
Template Known Secondary structure		S								T	T	S	B						T						T				T	T	T	S	B	T	S	B	T	T	T	T	B		S	S	S													T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions