Job Description P0AEC8 Confidence 100.00% Date Thu Jan 5 11:23:02 GMT 2012 Rank 1 Aligned Residues 177 % Identity 18% Template c2bu8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands Resolution 2.5 Å

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		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.																	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410								.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Query Sequence		K	S	Y	K	Q	L	E	D	Y	I	L	K	T	A	N	N	Y	Q	E	E	I	G	S	L	L	G	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	P	V	I	A	G	F	L	I	S	K	I	N	R	A	T	D	.	.	.	.	.	.	.	L	G	H	T	L	I	L	N	S	E	S
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	N	I	Q	Y	F	L	D	R	F	Y	L	S	R	I	S	I	R	M	L	I	N	Q	H	T	L	I	F	D	G	S	T	N	P	A	H	P	K	H	I	G	S	I	D	P	N	C	N	V	S	E	V	V	K	D	A	Y	D	M	A	K	L	L	C	D	K	Y	Y	M	A	S	P	D	L	E	I	Q	E	I	N
Template Known Secondary structure																													T	S	S	S		S	S		S		S		B	T	T	B																										S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		422	.	.				.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450						.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure					.	.	.																											.	.	.	.	.
Query SS confidence					.	.	.																											.	.	.	.	.
Query Sequence		Q	L	P	.	.	.	D	S	G	S	E	D	Q	V	A	T	L	I	T	T	L	G	N	L	I	E	N	A	L	E	A	L	.	.	.	.	.	G	P	E	P	G	G	E	I	S	V	T	L	H	Y	R	H	G	W	L	H	C	E	V	N	D	D	G	P	G	I	A	P	D	K	I	D	H	I	F	D	K	G	V
Query Conservation					.	.	.																											.	.	.	.	.
Alig confidence					.	.	.																											.	.	.	.	.
Template Conservation
Template Sequence		A	A	N	S	K	Q	P	I	H	M	V	Y	V	P	S	H	L	Y	H	M	L	F	E	L	F	K	N	A	M	R	A	T	V	E	S	H	E	S	S	L	I	L	P	P	I	K	V	M	V	A	L	G	E	E	D	L	S	I	K	M	S	D	R	G	G	G	V	P	L	R	K	I	E	R	L	F	S	Y	M	Y
Template Known Secondary structure		S	S	S	T	T	S																													T	T	T	T		S													S	S																			G	G	G	G		T	T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	K	G	S	E	R	G	V	G	L	A	L	V	K	Q	Q	V	E	N	L	G	G	S	I	A	V	E	S	E	P	G	I	F	T	Q	F	F	V	Q	I	P	W	D	G	E	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	K	Y	F	Q	G	D	L	Q	L	F	S	M	E	G	F	G	T	D	A	V	I	Y	L	K	A	L	S	T	D	S
Template Known Secondary structure		T						S	S													T	T									T	T											S	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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