Job Description P0AEC8 Confidence 98.59% Date Thu Jan 5 11:23:02 GMT 2012 Rank 39 Aligned Residues 110 % Identity 19% Template c1kijB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna gyrase subunit b; PDBTitle: crystal structure of the 43k atpase domain of thermus thermophilus2 gyrase b in complex with novobiocin Resolution 2.30 Å

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		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.																			.	.	.	490	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	A	T	L	I	T	T	L	G	N	L	I	E	N	A	L	E	A	L	G	P	E	P	G	G	E	I	S	V	T	L	H	Y	R	H	G	W	L	H	C	E	V	N	D	D	G	P	G	I	A	P	D	K	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	F	D	K	G
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.
Template Sequence		G	V	E	G	Y	H	H	L	F	K	E	I	L	D	N	A	V	D	E	A	L	A	G	Y	A	T	E	I	L	V	R	L	N	E	D	G	S	.	.	.	L	T	V	E	D	N	G	R	G	I	P	V	D	L	M	P	E	E	G	K	P	A	V	E	V	I	Y	N	T	L	H	S	G	G	K	F	E	Q	G	A
Template Known Secondary structure		S																					T	T	S										T	T	S		.	.	.						S	S						S			T	T	T	T										S	S				S	G	G	G	S	S	S
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.							.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.
Query Sequence		V	S	T	K	G	S	E	R	G	V	G	L	A	L	V	K	Q	Q	V	E	N	L	.	.	.	.	.	.	G	G	S	I	A	V	E	S	E	P	G	I	F	T	Q	F	F	V	Q	I	P	W	D	G	E	R	S	N	R
Query Conservation																								.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.
Template Conservation
Template Sequence		Y	K	V	S	G	G	L	H	G	V	G	A	S	V	V	N	A	L	S	E	W	T	V	V	E	V	F	R	E	G	K	H	H	R	I	A	F	S	R	G	E	V	T	E	P	L	R	V	V	G	E	A	P	R	G	K	T
Template Known Secondary structure						S		S	S	T	T	S							T											T	T									T	T														S	S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions