Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAL6
Confidence6.97%DateThu Jan 5 11:13:14 GMT 2012
Rank87Aligned Residues33
% Identity21%Templatec3lpeF_
PDB info PDB header:transferaseChain: F: PDB Molecule:dna-directed rna polymerase subunit e''; PDBTitle: crystal structure of spt4/5ngn heterodimer complex from methanococcus2 jannaschii
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   123......130....... ..140.........150.....
Predicted Secondary structure 










..















Query SS confidence 














. .

















Query Sequence  CRQCKEPQCMNVCPI. . GAITWQQKEGCITVDHKR
Query Conservation 
  
    
  


 .. 
           

   
Alig confidence 














..

















Template Conservation 
  
  
     

 


  
  
 
 


 



Template Sequence  CLKCKYLTNDEICPICHSPTSENWIGLLIVINPEK
Template Known Secondary structure  TTT
BSSSB
TTT

BS


S
TTT
Template Predicted Secondary structure 

























Template SS confidence 


































   4.....10.........20.........30........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions