Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAL6
Confidence99.51%DateThu Jan 5 11:13:14 GMT 2012
Rank9Aligned Residues63
% Identity19%Templatec1gthD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   142.......150.........160...... ...170........ .180.........190..... ....200....
Predicted Secondary structure 















...







...








.

Query SS confidence 
























. . .











. . .
















.








Query Sequence  WQQKEGCITVDHKRCIGCSACTTAC. . . PWMMATVNTESK. . . KSSKCVLCGECANACPT. GALKIIEWK
Query Conservation           

   



  
  

...
  

       ...   

 


 
   

 . 

      
Alig confidence 
























...











...
















.








Template Conservation           

   
  

 
   
    
 

         
    
 




   

   

 
    
Template Sequence  SNIEQVVAVIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIIDCIRMVSRT
Template Known Secondary structure 
SSS

TTT




S
S

TTT


TT





SSTTS

Template Predicted Secondary structure 









































Template SS confidence 





































































   939940.........950.........960.........970.........980.........990.........1000........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions