|   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
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|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
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|
|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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| . |
. |
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| . |
. |
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Query Sequence |   |
P | Q | S | P | V | M | R | R | L | T | L | Q | D | N | P | A | I | A | R | V | I | R | Q | V | S | A | E | . |
. |
Y | G | L | T | A | D | K | G | Y | T | V | A | D | P | N | L | D | E | L | Y | Q | V | Y | S | Q | . |
. |
P | G | H | A | Y | W | V | V | E | Y | E | G | E | V | V | G | G | G | G | I | A | P | L | T |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . | . |
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| . | . |
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Template Conservation |   |
  |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
V | S | D | S | G | A | V | V | A | Q | E | T | D | I | P | A | L | R | Q | L | A | S | A | A | F | A | Q | S | R | F | R | A | P | W | Y | A | P | D | A | S | G | R | F | Y | A | Q | W | I | E | N | A | V | R | G | T | F | D | H | Q | C | L | I | L | R | A | A | S | G | D | I | R | G | Y | V | S | L | R | E | L | N |
Template Known Secondary structure |   |
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| S |
|  |  |
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S | T | T |
| T | T | T | S |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S | S | S |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
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|  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |
|  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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|  |  |
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|  |  |  |
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|  |  |
Query SS confidence |   |
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Query Sequence |   |
G | S | E | S | D | I | C | E | L | Q | K | M | Y | F | L | P | A | I | R | G | K | G | L | A | K | K | L | A | L | M | A | M | E | Q | A | R | E | M | G | F | K | R | C | Y | L | E | T | T | A | F | L | K | E | A | I | A | L | Y | E | H | L | G | F | E | H | I | D | Y | A | L | G | C | T | G | H | V | D | C | E | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |
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|   |
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|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |
|
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
| . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
  |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |
Template Sequence |   |
A | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | A | R | I | G | L | L | A | G | R | G | A | G | A | E | L | M | Q | T | A | L | N | W | A | Y | A | R | G | K | T | T | L | R | V | A | T | Q | M | G | N | T | A | A | L | K | R | Y | I | Q | S | G | A | N | V | E | S | T | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y |
Template Known Secondary structure |   |
S | S | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |
Template Predicted Secondary structure |   |
|
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |
Template SS confidence |   |
|
|
|
|
|
|
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|
|
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|
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|
  |   |
160 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
220 |
  |
  |   |
162 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
R | M | L | R |
Query Conservation |   |
  |
|   |
|
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |   |   |   |
Template Sequence |   |
W | L | Y | R |
Template Known Secondary structure |   |
 |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |
|
Template SS confidence |   |
|
|
|
|
  |   |
221 | . | . | . |
  |