Job Description P39337 Confidence 99.84% Date Thu Jan 5 11:59:28 GMT 2012 Rank 23 Aligned Residues 142 % Identity 18% Template c2cntD_ PDB info PDB header:transferase Chain: D: PDB Molecule:modification of 30s ribosomal subunit protein s18; PDBTitle: rimi - ribosomal s18 n-alpha-protein acetyltransferase in2 complex with coenzymea. Resolution 2.4 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	M	R	R	L	T	L	Q	D	N	P	A	I	A	R	V	I	R	Q	V	S	A	E	Y	G	L	T	A	D	K	G	Y	T	V	A	D	P	N	L	D	E	L	Y	Q	V	Y	S	Q	P	G	H	A	Y	W	V	V	E	Y	E	G	E	V	V	G	G	G	G	I	A	P	L	T	G	S	E	S	D	I	C
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Template Sequence		N	T	I	S	I	L	S	T	T	D	L	P	A	A	W	Q	I	E	Q	R	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	P	W	S	E	K	T	F	F	G	N	Q	G	E	R	Y	L	N	L	K	L	T	A	D	D	R	M	A	A	F	A	I	T	Q	V	V	L	D	E	.	.	.	.	A
Template Known Secondary structure									G	G	G													.	.	.	.	.	.	.	.	.	.	.	.	.	S	S										S		S	T	T	B								S	S	S											T	T		.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.														.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		E	L	Q	K	M	Y	F	L	P	A	I	R	G	K	G	L	A	K	K	L	A	L	M	A	M	E	Q	A	R	E	M	G	F	K	R	C	Y	L	E	T	T	A	F	L	K	E	A	I	A	L	Y	E	H	L	G	F	E	H	I	D	Y	A	L	G	.	.	.	C	T	G	H	V	D	C	E	V	R	M	L	R
Query Conservation																																																																		.	.	.
Alig confidence																																																																		.	.	.
Template Conservation
Template Sequence		T	L	F	N	I	A	V	D	P	D	F	Q	R	R	G	L	G	R	M	L	L	E	H	L	I	D	E	L	E	T	R	G	V	V	T	L	W	L	E	V	R	A	S	N	A	A	A	I	A	L	Y	E	S	L	G	F	N	E	A	T	I	R	R	N	Y	Y	P	T	A	Q	G	H	E	D	A	I	I	M	A	L
Template Known Secondary structure										G	G	G		S	S	S																T	T										T	T											T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		166	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		145	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions