Job Description P39337 Confidence 93.62% Date Thu Jan 5 11:59:28 GMT 2012 Rank 158 Aligned Residues 126 % Identity 8% Template c1p4nA_ PDB info PDB header:ligase Chain: A: PDB Molecule:femx; PDBTitle: crystal structure of weissella viridescens femx:udp-murnac-2 pentapeptide complex Resolution 1.90 Å

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		8	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		S	P	V	M	R	R	L	.	T	L	Q	D	N	P	A	I	A	R	V	I	R	Q	V	S	A	E	Y	G	L	T	A	D	K	G	Y	T	V	A	D	P	N	L	D	E	L	Y	Q	V	Y	S	Q	P	G	H	A	Y	W	V	V	E	Y	E	G	E	V	V	G	G	G	G	I	A	P	L	T	G	S	E	S	D
Query Conservation									.
Alig confidence									.																									.	.	.	.	.																																									.	.	.
Template Conservation																																		.	.	.	.	.																																									.	.	.
Template Sequence		G	V	E	V	H	S	G	N	S	A	T	E	L	D	E	F	F	K	T	Y	T	T	M	A	E	R	H	G	I	T	H	R	.	.	.	.	.	P	I	E	Y	F	Q	R	M	Q	A	A	F	D	A	D	T	M	R	I	F	V	A	E	R	E	G	K	L	L	S	T	G	I	A	L	K	Y	G	R	K	.	.	.
Template Known Secondary structure		T								S																			T					.	.	.	.	.												S		T	T	T									T	T												T	T		.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.																																									.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		I	C	E	L	Q	K	M	Y	F	L	P	A	I	R	G	K	G	L	A	K	K	L	A	L	M	A	M	E	Q	A	R	E	M	G	F	K	R	C	Y	L	E	.	.	.	T	T	A	F	L	K	E	A	I	A	L	Y	E	H	L	G
Query Conservation																																											.	.	.
Alig confidence		.													.																												.	.	.
Template Conservation		.													.
Template Sequence		.	I	W	Y	M	Y	A	G	S	M	D	G	N	.	T	Y	Y	A	P	Y	A	V	Q	S	E	M	I	Q	W	A	L	D	T	N	T	D	L	Y	D	L	G	G	I	E	S	E	S	T	D	D	S	L	Y	V	F	K	H	V	F	V
Template Known Secondary structure		.										S	S		.		T	T																T	T		S								S		S	S	T	T	S
Template Predicted Secondary structure		.													.
Template SS confidence
			252	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions