 |
Job Description | P39337 | Confidence | 99.61% | Date | Thu Jan 5 11:59:28 GMT 2012 |
Rank | 107 | Aligned Residues | 131 |
% Identity | 18% | Template | c1bo4A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:protein (serratia marcescens aminoglycoside-3-n- |
PDBTitle: crystal structure of a gcn5-related n-acetyltransferase: serratia2 marescens aminoglycoside 3-n-acetyltransferase
|
Resolution | 2.30 Å |
|
 |
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
|
. | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
M | R | R | L | T | L | Q | D | N | P | A | I | A | R | V | I | R | Q | V | S | A | E | Y | G | L | T | A | D | K | G | Y | T | V | A | D | P | N | L | D | E | L | Y | Q | V | Y | S | Q | P | G | H | A | Y | W | V | V | E | Y | E | G | E | V | V | G | G | G | G | I | A | P | L | . |
. |
T | G | S | E | S | D | I | C |
Query Conservation |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | C | R | L | G | P | D | Q | V | K | S | M | R | A | A | L | D | L | F | G | R | E | . |
. |
F | G | D | V | A | T | Y | S | Q | H | Q | P | D | S | D | Y | L | G | N | L | L | R | S | K | T | F | I | A | L | A | A | F | D | Q | E | A | V | V | G | A | L | A | A | Y | V | L | P | K | F | E | Q | P | R | S | E | I |
Template Known Secondary structure |   |
 |  |  |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | T | T |
|  |  |  |  |  | S | S |
|
|
|  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S | S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
  |
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | Q | K | M | Y | F | L | P | A | I | R | G | K | G | L | A | K | K | L | A | L | M | A | M | E | Q | A | R | E | M | G | F | K | R | C | Y | L | E | T | T | A | F | L | K | E | A | I | A | L | Y | E | H | L | G |
Query Conservation |   |
  |
|   |   |
|   |
|   |   |   |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
|   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|
Template Sequence |   |
Y | I | Y | D | L | A | V | S | G | E | H | R | R | Q | G | I | A | T | A | L | I | N | L | L | K | H | E | A | N | A | L | G | A | Y | V | I | Y | V | Q | A | D | Y | G | D | D | P | A | V | A | L | Y | T | K | L | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| T | T | S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
|
|
| S |
|
| S | S |
|
|
|  |  |  |
| . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|