Job Description P0AEM0 Confidence 14.72% Date Thu Jan 5 11:23:40 GMT 2012 Rank 89 Aligned Residues 82 % Identity 10% Template c3k2yD_ PDB info PDB header:nucleotide binding protein Chain: D: PDB Molecule:uncharacterized protein lp_0118; PDBTitle: crystal structure of protein lp_0118 from lactobacillus2 plantarum,northeast structural genomics consortium target3 lpr91b Resolution 2.40 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		A	L	F	R	L	G	D	A	S	L	S	E	G	L	E	Q	H	L	L	G	L	K	V	G	D	K	T	T	F	S	L	E	P	D	A	A	F	G	V	P	S	P	D	L	I	Q	Y	F	S	R	R	E	F	M	.	D	A	G	E	P	E	I	G	A	I	M	L	F	T	A	M	D	G	S	E	M	P	G	V	I
Query Conservation																																																								.
Alig confidence																																							.	.	.															.
Template Conservation																																							.	.	.
Template Sequence		D	T	V	T	V	V	G	E	R	Y	V	D	D	I	V	A	T	L	T	T	L	R	V	G	M	A	V	L	L	Q	R	E	S	G	N	Q	Y	.	.	.	D	D	N	A	I	S	V	W	T	L	Q	H	A	K	L	G	Y	I	A	R	Y	Q	N	Q	P	Y	A	T	L	M	D	Q	G	Q	R	L	Y	G	I	V
Template Known Secondary structure									G	G	G	S	T	T							T			T	T									T	T		T	T	.	.	.		T	T							T	T									G	G	G										T	T
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		114	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	I	N	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	L	D	Q	Q
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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