Job Description P0AEM0 Confidence 25.36% Date Thu Jan 5 11:23:40 GMT 2012 Rank 67 Aligned Residues 61 % Identity 21% Template c2p4vA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor greb; PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution Resolution 2.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	S	V	Q	S	N	S	A	V	L	V	H	F	T	L	K	L	D	D	G	T	T	A	E	S	T	R	N	N	G	K	P	A	L	F	R	L	G	D	A	S	L	S	E	G	L	E	Q	H	L	L	G	L	K	V	G	D	K	T	T	F	S	L	E
Query Conservation
Alig confidence																.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		E	G	K	V	F	F	G	A	W	V	E	I	E	N	.	.	.	.	D	D	G	V	T	H	R	F	R	I	V	G	Y	D	E	I	F	G	R	K	D	Y	I	S	I	D	S	P	M	A	R	A	L	L	K	K	E	V	G	D	L	A	V	V	N	T	P
Template Known Secondary structure			S	S		S	S	S								.	.	.	.	T	T								B			S	T	T			S	S	S			B		T	T	S						S	T	T			T	T								S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions