Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEM0
Confidence30.12%DateThu Jan 5 11:23:40 GMT 2012
Rank61Aligned Residues74
% Identity12%Templatec2khjA_
PDB info PDB header:ribosomal proteinChain: A: PDB Molecule:30s ribosomal protein s1; PDBTitle: nmr structure of the domain 6 of the e. coli ribosomal2 protein s1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50.........60.........70.. .......80.........90.........100.........110.........120....
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Query Sequence  LEQHLLGLKVGDKTTFSLEPDAAFG. . . VPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVD
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Template Sequence  FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSV. . . . GDEVEAKFTGVDRKNRAIS
Template Known Secondary structure  TTT

SSS
SS

STT
B

B
TT


SSSSSSGGGS

T....T
TTTT
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   2.......10.........20.........30.........40.........50........ .60.........70.......
 
   125
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Query Sequence  F
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Template Conservation 
Template Sequence  L
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   78
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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