Job Description P0AAG3 Confidence 95.41% Date Thu Jan 5 11:12:51 GMT 2012 Rank 335 Aligned Residues 133 % Identity 12% Template c3te6A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain Resolution 2.80 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	G	E	V	V	V	V	C	G	P	S	G	S	G	K	S	T	L	I	K	T	V	N	G	L	E	P	V	Q	Q	G	E	I	T	V	D	G	I	V	V	N	D	K	K	T	D	L	A	K	L	R	S	R	V	G	M	V	F	Q	H	F	E	L	F	P	H	L	S	I	I	E	N	L	T	L	A	Q	V	K
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.								.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.								.	.	.
Template Sequence		S	Q	N	K	L	F	Y	I	T	N	A	D	D	S	T	K	F	Q	L	V	N	D	V	X	D	E	L	I	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	K	E	L	P	I	F	D	Y	I	H	I	D	A	L	E	L	X	D	.	A	L	Y	E	K	I	W	.	.	.	F	A
Template Known Secondary structure		T												S																	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	S	S										T	T					.								.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.								.	.	.
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600																	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620		.	.	.	.	.	.	.				.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	K	R	D	K	A	P	A	R	E	K	A	L	K	L	L	E	R	V	G	L	S	A	H	A	N	K	F	P	A	Q	L	S	G	G	Q	Q	Q	R	V	A	I	A	R	A	L	C	M	D	P	I	A	M	L	F	D	E	P	T	S	A	L	D	P	E	M	I	N	E	V	L	D	V	M	V	E	L	A	N
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Sequence		I	S	K	E	N	G	D	I	S	L	E	A	L	N	F	Y	I	T	N	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	K	K	R	K	T	L	I	L	I	Q	N	P	E	N	L	L	S	E	K	I	L	Q	Y	F	E	K	W	I	S	S	.	K	N
Template Known Secondary structure			S																		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	S											S	S	S			T													.	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template SS confidence
		632	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.																									.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.		.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	M	T	M	M	V	V	T	H	E	M	G	F	A	R	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	L	S	I	I	C	V	G	G	H	N	V	T	I	R	E	Q
Template Known Secondary structure												S	S
Template Predicted Secondary structure
Template SS confidence
		689	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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