Job Description P0AAG3 Confidence 96.91% Date Thu Jan 5 11:12:51 GMT 2012 Rank 151 Aligned Residues 122 % Identity 15% Template c3hr8A_ PDB info PDB header:recombination Chain: A: PDB Molecule:protein reca; PDBTitle: crystal structure of thermotoga maritima reca Resolution 1.95 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	K	G	E	V	V	V	V	C	G	P	S	G	S	G	K	S	T	L	I	K	T	V	N	G	L	E	P	V	Q	Q	G	E	I	T	V	D	G	I	V	V	N	D	K	K	T	D	L	A	K	L	R	S	R	V	G	M	V	F	Q	H	F	E	L	F	P	H	L	S	I	I	E	N	L	T	L	A	Q	V
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	P	R	G	R	I	V	E	I	F	G	Q	E	S	S	G	K	T	T	L	A	L	H	A	I	A	E	A	Q	K	M	G	G	V	A	A	F	I	D	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T								S	T	T	S	S															T	T								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	L	K	R	D	K	A	P	A	R	E	K	A	L	K	L	L	E	R	V	G	L	S	A	H	A	N	K	F	P	A	Q	L	S	G	G	Q	Q	Q	R	V	A	I	A	R	A	L	C	M	D	P	I	A	M	L	F	D	E	P	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	H	A	L	D	P	V	Y	A	K	N	L	G	V	D	L	K	S	L	L	I	S	Q	P	D	H	G	E	Q	A	L	E	I	V	D	E	L	V	R	S	G	V	V	D	L	I	V	V	D	S	V	A	A	L	V	P	R	A	E	I	E	G	A	M	G	D	M	Q	V	G	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.												T			G	G	G							S	S														T	S			S							T	T	T								T	T				S	S		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		D	P	E	M	I	N	E	V	L	D	V	M	V	E	L	A	N	E	.	G	M	T	M	M	V	V	T	H
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		Q	A	R	L	M	S	Q	A	L	R	K	I	A	G	S	V	N	K	S	K	A	V	V	I	F	T	N	Q
Template Known Secondary structure																			T	S	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions