Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAG3
Confidence95.07%DateThu Jan 5 11:12:51 GMT 2012
Rank379Aligned Residues71
% Identity23%Templatec3d3qB_
PDB info PDB header:transferaseChain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of trna delta(2)-isopentenylpyrophosphate2 transferase (se0981) from staphylococcus epidermidis.3 northeast structural genomics consortium target ser100
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50......... 60.........70.........80.........90.........100.
Predicted Secondary structure 













.......




















Query SS confidence 






























. . . . . . .









































Query Sequence  VVVVCGPSGSGKSTLIKTVNGLEPVQQGEIT. . . . . . . VDGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLA
Query Conservation 
  
 
 








  
 
      
 
 .......  
                
  
 
   
    

 
 
   
Alig confidence 






















...




.......









































Template Conservation 

 
 







 

  

  
... 







 



 








  
   






   
 
 


  
   
Template Sequence  LIVIVGPTASGKTELSIEVAKKF. . . NGEIISGDSXQVYQGXDIGTAKVTTEEXEGIPHYXIDILPPDASFSAYEFKKRA
Template Known Secondary structure 
STTSST...T

SSTTBTT

TTTT


TTTTTT

SSS
B
TTS


Template Predicted Secondary structure 






...






























Template SS confidence 















































































   910.........20.........30. ........40.........50.........60.........70.........80.....
 
   102
Predicted Secondary structure 
Query SS confidence 
Query Sequence  Q
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  E
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   86
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions