Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAG3
Confidence98.11%DateThu Jan 5 11:12:51 GMT 2012
Rank96Aligned Residues160
% Identity14%Templatec3bh0A_
PDB info PDB header:replicationChain: A: PDB Molecule:dnab-like replicative helicase; PDBTitle: atpase domain of g40p
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........100...
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Query Sequence  VKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGEITVDGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQV
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Template Sequence  YKRRNFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHS. . . . . . . . . . . . . . . . . . . . . . . . . . . LEMGKKENIKRLIV
Template Known Secondary structure  B
TT


TTSSTTT
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   192.......200.........210.........220.........230 .........240....
 
   104.....110.... .....120.........130.........140.........150.... .....160.. .
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Query Sequence  KVLKRDKAPAR. . . . . . . . . . . EKALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMD. . PIAMLFDE. . . . . . . P
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Template Sequence  TAGSINAQKIKAARRDFASEDWGKLSMAIGEISNSNINIFDKAGQSVNYIWSKTRQTKRKNPGKRVIVMIDYLQLLEPAK
Template Known Secondary structure  TT

S

SS
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S

BTSSS


GGGSB
S
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   245....250.........260.........270.........280.........290.........300.........310.........320....
 
   164.....170.........180..... ....190....... ..200.........210
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Query Sequence  TSALDPEMINEVLDVMVELANE. GMTMMVVTHEMG. . . . . . . . . . . . . . . . . . . FARKVANRVIFMD
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Template Sequence  ANDSRTNQISQISRDLKKMARELDVVVIALSQLSRQVEQRQDKRPMLSDLRESGQLEQDADIIEFLY
Template Known Secondary structure  TTS
T



GGGTTSSS



GGGGTTTS
S
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   325....330.........340.........350.........360.........370.........380.........390.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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