 |
Job Description | P0AAG3 | Confidence | 95.48% | Date | Thu Jan 5 11:12:51 GMT 2012 |
Rank | 329 | Aligned Residues | 75 |
% Identity | 20% | Template | c3a8tA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:adenylate isopentenyltransferase; |
PDBTitle: plant adenylate isopentenyltransferase in complex with atp
|
Resolution | 2.37 Å |
|
 |
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
. | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . |  |
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
| . |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Query Sequence |   |
K | K | G | E | V | V | V | V | C | G | P | S | G | S | G | K | S | T | L | I | K | T | V | N | G | L | E | P | V | Q | Q | G | E | I | T | . |
. |
. |
. |
. |
. |
. |
V | D | G | I | V | V | N | D | K | K | T | D | L | A | K | L | R | S | R | V | G | M | V | F | Q | H | F | E | L | F | P | H | . |
L | S | I | I | E |
Query Conservation |   |
  |   |
|
|
|   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |
|   | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |
|   |   |   | . |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |
|   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |   |   | . | . | . |   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |
|
|   |   |
Template Sequence |   |
R | K | E | K | L | L | V | L | M | G | A | T | G | T | G | K | S | R | L | S | I | D | L | A | A | H | F | P | . |
. |
. |
L | E | V | I | N | S | D | K | M | Q | V | Y | K | G | L | D | I | T | T | N | K | I | S | V | P | D | R | G | G | V | P | H | H | L | L | G | E | V | D | P | A | R | G | E | L | T | P | A | D |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  |  | T | T | S |
| . | . | . |  |  |  |  |  |
|
| S | S | T | T | B | S | S |
| T | T | T | T | T |
|
|
| S | G | G | G | T | T |
|
|  |  | S | S | S |
| B |
| G | G | G |
|
|
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
  |
  |   |
97 | . | . | 100 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
N | L | T | L | A | Q |
Query Conservation |   |
  |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
Template Sequence |   |
F | R | S | L | A | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
105 | . | . | . | . | 110 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|