Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAG3
Confidence100.00%DateThu Jan 5 11:12:51 GMT 2012
Rank15Aligned Residues236
% Identity31%Templatec2d62A_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:multiple sugar-binding transport atp-binding PDBTitle: crystal structure of multiple sugar binding transport atp-2 binding protein
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70..... ...
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Query Sequence  MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGEITVDGIVVNDKKTDLAKL. . RSR
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Template Sequence  EVKLINIWKRFGDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRXIAGLEEPTRGQIYIEDNLVADPEKGVFVPPKERD
Template Known Secondary structure  STT
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STTSSTSS

STTGGGT

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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   7980.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  VGMVFQHFELFPHLSIIENLTLAQVKVLKRDKAPAREKALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAM
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Template Sequence  VAXVFQSYALYPHXTVYDNIAFP. LKLRKVPKQEIDKRVREVAEXLGLTELLNRKPRELSGGQRQRVALGRAIIRRPKVF
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   86...90.........100........ .110.........120.........130.........140.........150.........160....
 
   159160.........170.........180..... ....190.........200.........210.........220.........230.......
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Query Sequence  LFDEPTSALDPEMINEVLDVMVELANE. GMTMMVVTHEMGFARKVANRVIFMDEGKIVEDSPKDAFFDDPKSDRAKDFLA
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Template Sequence  LXDEPLSNLDAKLRVKXRAELKKLQRQLGVTTIYVTHDQVEAXTXGDRIAVXNKGELQQVGTPDEVYYKPVNTFVAGFIG
Template Known Secondary structure  STTTT

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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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