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Job DescriptionP0AAG3
Confidence100.00%DateThu Jan 5 11:12:51 GMT 2012
Rank9Aligned Residues233
% Identity34%Templatec1z47B_
PDB info PDB header:ligand binding proteinChain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10. ........20.........30.........40.........50.........60.........70.........80
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Query Sequence  ITLKNVSKWY. GHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGEITVDGIVVNDKKTDLAKLRSRVG
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Template Sequence  IEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQ. . . . KRNVG
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TTSTT

TT

STTSSTSS

STT
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GG....GSS
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   15....20.........30.........40.........50.........60.........70.........80..... ....90
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  MVFQHFELFPHLSIIENLTLAQVKVLKRDKAPAREKALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLF
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Template Sequence  LVFQNYALFQHMTVYDNVSFG. LREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLF
Template Known Secondary structure  TT



TTS
TT.GGGTT

TT
GGGTTS
GGGS
TT

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   91........100.........110. ........120.........130.........140.........150.........160.........
 
   161........170.........180..... ....190.........200.........210.........220.........230.........
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Query Sequence  DEPTSALDPEMINEVLDVMVELANE. GMTMMVVTHEMGFARKVANRVIFMDEGKIVEDSPKDAFFDDPKSDRAKDFLAKI
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Template Sequence  DEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGES
Template Known Secondary structure  STTTTS


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   170.........180.........190.........200.........210.........220.........230.........240.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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