 |
Job Description | P77559 | Confidence | 44.47% | Date | Thu Jan 5 12:30:33 GMT 2012 |
Rank | 325 | Aligned Residues | 52 |
% Identity | 17% | Template | d2obpa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| ReutB4095-like
|
Resolution | 1.70 |
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
. | . | . | . | . | 50 | . | . | . | . | . | . | |
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|  |  |  |  |  |
|
|
|
| . |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | F | G | R | A | A | A | R | L | N | I | S | Q | P | P | L | S | Q | Q | I | Q | A | L | E | Q | Q | . |
I | G | A | R | L | L | A | R | T | N | R | S | . |
V | L | L | T | A | A | G | K | Q | F | L | A | D | S |
Query Conservation |   |
|   |
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   | . |
|
|   |   |
|
|   |
|   |   |   |
| . |   |   |
|
|   |   |
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|
|
|   |
|
|
|
|   |   |
|
|
|   |   |   |   |   |   |
|
|
|   |
|   |
|   |
|
|   |   |
|   |   |
|   |   |   |
|
Template Sequence |   |
S | L | P | K | I | A | K | R | A | Q | L | P | X | S | V | L | R | R | V | L | T | Q | L | Q | A | A | G | L | A | D | V | S | V | E | A | D | G | R | G | H | A | S | L | T | Q | E | G | A | A | L | A | A | Q | L |
Template Known Secondary structure |   |
B |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|