Return to main results Retrieve Phyre Job Id

Job DescriptionP77559
Confidence59.19%DateThu Jan 5 12:30:33 GMT 2012
Rank284Aligned Residues21
% Identity24%Templated2bgca1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24..... 30.........40....
Predicted Secondary structure 

.
Query SS confidence 





.














Query Sequence  AARLNI. SQPPLSQQIQALEQQ
Query Conservation 
  
 
.

 


  
  

  
Alig confidence 





.














Template Conservation 
  

  






 
  
   
Template Sequence  GYSSGIAHSSAVSRIISKLKQE
Template Known Secondary structure  TT


T
Template Predicted Secondary structure 




Template SS confidence 





















   175....180.........190......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions