Job Description P77559 Confidence 95.44% Date Thu Jan 5 12:30:33 GMT 2012 Rank 125 Aligned Residues 86 % Identity 9% Template d1sfxa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like Resolution 1.55

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																		.	.																																							.	.	.	.
Query SS confidence																		.	.																																							.	.	.	.
Query Sequence		I	E	L	R	H	L	R	Y	F	V	A	V	A	E	E	L	.	.	H	F	G	R	A	A	A	R	L	N	I	S	Q	P	P	L	S	Q	Q	I	Q	A	L	E	Q	Q	I	G	A	R	L	L	A	R	T	N	R	S	.	.	.	.	V	L	L	T	A	A	G	K	Q	F	L	A	D	S	R	Q	I	L	S	M
Query Conservation																		.	.																																							.	.	.	.
Alig confidence																		.	.																																.							.	.	.	.
Template Conservation																																																			.
Template Sequence		F	K	P	S	D	V	R	I	Y	S	L	L	L	E	R	G	G	X	R	V	S	E	I	A	R	E	L	D	L	S	A	R	F	V	R	D	R	L	K	V	L	L	K	R	G	F	V	R	R	.	E	I	V	E	K	G	W	V	G	Y	I	Y	S	A	E	K	P	E	K	V	L	K	E	F	K	S	S	I	L	G
Template Known Secondary structure																			B										T																T	T	S				.					S	S	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	D	A	A	A	R	A	E	R	L	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	E	R	I	E	K	X	F	T	D	G	S
Template Known Secondary structure								T	T	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions