Job Description P77559 Confidence 97.23% Date Thu Jan 5 12:30:33 GMT 2012 Rank 68 Aligned Residues 79 % Identity 14% Template d1s3ja_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators Resolution 2.25

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																				.	.																																.	.	.	.
Query SS confidence																				.	.																																.	.	.	.
Query Sequence		M	N	I	E	L	R	H	L	R	Y	F	V	A	V	A	E	E	L	.	.	H	F	G	R	A	A	A	R	L	N	I	S	Q	P	P	L	S	Q	Q	I	Q	A	L	E	Q	Q	I	G	A	R	L	.	.	.	.	L	A	R	T	N	R	S	V	L	L	T	A	A	G	K	Q	F	L	A	D	S	R	Q	I	L
Query Conservation																				.	.																																.	.	.	.
Alig confidence																				.	.																																.	.	.	.
Template Conservation
Template Sequence		Q	G	V	T	P	A	Q	L	F	V	L	A	S	L	K	K	H	G	S	L	K	V	S	E	I	A	E	R	X	E	V	K	P	S	A	V	T	L	X	A	D	R	L	E	Q	K	N	L	I	A	R	T	H	N	T	K	D	R	R	V	I	D	L	S	L	T	D	E	G	D	I	K	F	E	E	V	L	A	G	R
Template Known Secondary structure		T	T																S												T	S															T	T	S							S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		75	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	V	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	I	X	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions