Job Description P77559 Confidence 70.07% Date Thu Jan 5 12:30:33 GMT 2012 Rank 245 Aligned Residues 195 % Identity 7% Template d1atga_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.20

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.											.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	F	T	S	S	A	P	F	I	R	A	V	S	D	T	L	S	L	F	R	R	D	Y	P	D	V	H	L	Q	T	R	E	M	N	T	R	E	Q	I	A	P	L	I	E	G	T	L	D	M	G	L	L	R	N	T	A	L	.	.	.	.	.	.	.	.	.	.	P	E	S	L	E	H	A	V	I	V	H	E
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.
Alig confidence																											.																																	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.
Template Sequence		L	K	V	V	T	A	T	N	F	L	G	T	L	E	Q	L	A	G	Q	F	A	K	Q	T	G	.	H	A	V	V	I	S	S	G	S	S	G	P	V	Y	A	Q	I	V	N	G	A	P	Y	N	V	F	F	S	A	D	E	K	S	P	E	K	L	D	N	Q	G	F	A	L	P	G	S	R	F	T	Y	A	I	G
Template Known Secondary structure								G	G	G																	.																			T	T				S					S	S	S									T	T		B		T	T
Template Predicted Secondary structure																											.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.						.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																					.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.
Query Sequence		P	L	M	A	M	I	P	H	D	H	P	L	A	N	N	P	N	V	T	L	A	E	L	A	K	E	P	F	V	F	F	D	P	H	V	G	T	G	L	Y	D	D	I	L	G	L	M	R	R	Y	H	.	.	.	.	.	L	T	P	V	I	T	Q	E	V	G	E	A	M	T	I	I	G	L	V	S	A	G	L	G
Query Conservation																																																					.	.	.	.	.
Alig confidence																												.	.																								.	.	.	.	.
Template Conservation																												.	.
Template Sequence		K	L	V	L	W	S	A	K	P	G	L	V	D	N	Q	G	K	V	L	A	G	N	G	W	R	H	.	.	I	A	I	S	N	P	Q	I	A	P	Y	G	L	A	G	T	Q	V	L	T	H	L	G	L	L	D	K	L	T	A	Q	E	R	I	V	E	A	N	S	V	G	Q	A	H	S	Q	T	A	S	G	A	A
Template Known Secondary structure								S	S	T	T	T	S		T	T	S	G	G	G	G	S	S	S		S		.	.						T	T	T														T	T								T	T						S	S										T	T	S	S
Template Predicted Secondary structure																												.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
			242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure		.																									.	.	.
Query SS confidence		.																									.	.	.
Query Sequence		.	V	S	I	L	P	A	S	F	K	R	V	Q	L	N	E	M	R	W	V	P	I	A	E	E	.	.	.	D	A	V	S	E	M	W	L	V	W	P	K	H	H	E	Q	S	P	A	A	R	N	F	R	I	H	L	L	N
Query Conservation		.																									.	.	.
Alig confidence		.																									.	.	.
Template Conservation
Template Sequence		D	L	G	F	V	A	L	A	Q	I	I	Q	A	A	A	K	I	P	G	S	H	W	F	P	P	A	N	Y	Y	E	P	I	V	Q	Q	A	V	I	T	K	S	T	A	E	K	A	N	A	E	Q	F	M	S	W	M	K	G
Template Known Secondary structure		S						G	G	G	T			T	T	S			S	S							G	G	G	S										B	T	T		S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions