Job Description P77559 Confidence 97.34% Date Thu Jan 5 12:30:33 GMT 2012 Rank 63 Aligned Residues 77 % Identity 23% Template c3e6mD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:marr family transcriptional regulator; PDBTitle: the crystal structure of a marr family transcriptional2 regulator from silicibacter pomeroyi dss. Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																			.	.																																						.	.	.	.	.
Query SS confidence																			.	.																																						.	.	.	.	.
Query Sequence		N	I	E	L	R	H	L	R	Y	F	V	A	V	A	E	E	L	.	.	H	F	G	R	A	A	A	R	L	N	I	S	Q	P	P	L	S	Q	Q	I	Q	A	L	E	Q	Q	I	G	A	R	L	L	A	R	T	N	R	.	.	.	.	.	S	V	L	L	T	A	A	G	K	Q	F	L	A	D	S	R	Q	I	L
Query Conservation																			.	.																																						.	.	.	.	.
Alig confidence																			.	.																									.													.	.	.	.	.
Template Conservation																																													.
Template Sequence		K	L	P	T	P	K	L	R	L	L	S	S	L	S	A	Y	G	E	L	T	V	G	Q	L	A	T	L	G	V	X	E	Q	S	T	T	S	R	T	V	D	Q	L	V	.	D	E	G	L	A	A	R	S	I	S	D	A	D	Q	R	K	R	T	V	V	L	T	R	K	G	K	K	K	L	A	E	I	S	P	L	I
Template Known Secondary structure		T																S											T	T	S														.		T	T	S							S	S	S	S
Template Predicted Secondary structure																																													.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		75	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	V	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	D	F	H	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions