Return to main results Retrieve Phyre Job Id

Job DescriptionP77559
Confidence97.49%DateThu Jan 5 12:30:33 GMT 2012
Rank49Aligned Residues75
% Identity20%Templatec2nyxB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:probable transcriptional regulatory protein, rv1404; PDBTitle: crystal structure of rv1404 from mycobacterium tuberculosis
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10........ .20.........30.........40.........50..... ....60.........70..
Predicted Secondary structure 



..








.......



Query SS confidence 
















. .




































. . . . . . .
















Query Sequence  NIELRHLRYFVAVAEEL. . HFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNR. . . . . . . SVLLTAAGKQFLADSRQ
Query Conservation   
 
  
  
  
   
..
 
 

  
 


 


  
  

  

  

 
   .......
  

  
  
   
  
Alig confidence 
















..

























...







.......
















Template Conservation 


  
  

  
          

  
 
    

  
  
   ...


 
     
 
   
 

  
         
Template Sequence  NITIPQFRTLVILSNHGPINLATLATLLGVQPSATGRXVDRLVGA. . . ELIDRLPHPTSRRELLAALTKRGRDVVRQVTE
Template Known Secondary structure  T


STS
T...TS

SSS
S


Template Predicted Secondary structure 










...








Template SS confidence 















































































   42.......50.........60.........70.........80...... ...90.........100.........110........
 
   73......
Predicted Secondary structure 


Query SS confidence 






Query Sequence  ILSMVDD
Query Conservation         
Alig confidence 






Template Conservation         
Template Sequence  HRRTEIA
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 






   119120.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions