Job Description P77559 Confidence 96.85% Date Thu Jan 5 12:30:33 GMT 2012 Rank 89 Aligned Residues 81 % Identity 7% Template c1p4xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue; PDBTitle: crystal structure of sars protein from staphylococcus aureus Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.																																					.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.																																					.	.	.	.	.	.	.
Query Sequence		M	N	I	E	L	R	H	L	R	Y	F	V	A	V	A	E	E	L	H	.	.	.	.	F	G	R	A	A	A	R	L	N	I	S	Q	P	P	L	S	Q	Q	I	Q	A	L	E	Q	Q	I	G	A	R	L	L	A	R	T	N	R	.	.	.	.	.	.	.	S	V	L	L	T	A	A	G	K	Q	F	L	A	D
Query Conservation																					.	.	.	.																																					.	.	.	.	.	.	.
Alig confidence																					.	.	.	.																										.	.	.									.	.	.	.	.	.	.
Template Conservation																																																		.	.	.
Template Sequence		L	T	L	S	F	V	E	F	T	I	L	A	I	I	T	S	Q	N	K	N	I	V	L	L	K	D	L	I	E	T	I	H	H	K	Y	P	Q	T	V	R	A	L	N	N	L	K	K	Q	.	.	.	G	Y	L	I	K	E	R	S	T	E	D	E	R	K	I	L	I	H	M	D	D	A	Q	Q	D	H	A	E	Q
Template Known Secondary structure			S	S													T	T	T	T												S	S	S																.	.	.	T	S	S						S	S	S	T	T
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	Q	I	L	S	M	V	D	D	A	A	A	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	A	Q	V	N	Q	L	L	A	D	K	D	H	L
Template Known Secondary structure										T	S	S	S		G	G
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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