Return to main results Retrieve Phyre Job Id

Job DescriptionP77295
Confidence97.67%DateWed Jan 25 15:21:10 GMT 2012
Rank126Aligned Residues69
% Identity20%Templated3deua1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30..... ....40.........50.........60.........70.........80.........90......
Predicted Secondary structure 
.













Query SS confidence 












.




























































Query Sequence  HPKRLLILCMLSG. SPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNV
Query Conservation     
  

  
  .    
  


  
 

  


 

  
   


     
    
 
    
  
   
   
Alig confidence 












.





































.....

















Template Conservation 
     

  
       
   

  
      

  
  
   


 
   .....   
  
           
Template Sequence  TQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQKR. . . . . IKLTEKAEPLIAEMEEVI
Template Known Secondary structure 
S
SSTS
TTS

.....
GGG
Template Predicted Secondary structure 














.....



Template SS confidence 










































































   31........40.........50.........60.........70.........80.. .......90.........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions