Job Description P77295 Confidence 98.39% Date Wed Jan 25 15:21:10 GMT 2012 Rank 47 Aligned Residues 81 % Identity 20% Template d2fswa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain HxlR-like Resolution 2.16

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.																									.	.	.
Query SS confidence																																					.																									.	.	.
Query Sequence		A	A	A	L	L	K	A	M	S	H	P	K	R	L	L	I	L	C	M	L	S	G	S	P	G	T	S	A	G	E	L	T	R	I	T	.	G	L	S	A	S	A	T	S	Q	H	L	A	R	M	R	D	E	G	L	I	D	S	Q	R	.	.	.	D	A	Q	R	I	L	Y	S	I	K	N	E	A	V	N	A	I
Query Conservation																																					.																									.	.	.
Alig confidence																										.											.																									.	.	.														.
Template Conservation																										.																																																				.
Template Sequence		V	R	K	S	X	Q	I	F	A	G	K	W	T	L	L	I	I	F	Q	I	N	R	R	I	.	I	R	Y	G	E	L	K	R	A	I	P	G	I	S	E	K	X	L	I	D	E	L	K	F	L	C	G	K	G	L	I	K	K	K	Q	Y	P	E	V	P	P	R	V	E	Y	S	L	T	P	L	G	.	E	K	V
Template Known Secondary structure										T	S	S	S									T	T	S		.										S	T	T																T	T	S								S	S	S												.		T	T
Template Predicted Secondary structure																										.																																																				.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.
		90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	T	L	K	N	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	I	I	D	E	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions