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5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | Q | L | Q | A | S | A | E | Q | A | A | A | L | L | K | A | M | S | H | P | K | R | L | L | I | L | C | M | L | S | G | S | P | G | T | S | A | G | E | L | T | R | I | T | G | L | S | A | S | A | T | S | Q | H | L | A | R | M | R | D | E | G | L | I | D | S | Q | R | D | A | Q | R | I | L | Y | S | I | K | N | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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Alig confidence |   |
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Template Conservation |   |
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|   |   |   |   | . |   |   |   |   |
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Template Sequence |   |
E | D | M | E | K | R | A | N | E | V | A | N | L | L | K | T | L | S | H | P | V | R | L | X | L | V | C | T | L | V | E | G | E | . |
F | S | V | G | E | L | E | Q | Q | I | G | I | G | Q | P | T | L | S | Q | Q | L | G | V | L | R | E | S | G | I | V | E | T | R | R | N | I | K | Q | I | F | Y | R | L | T | E | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  |  |  | T |
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| . | B |
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| T | T |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
| S | S | S |
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| S | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
A | V | N | A | I | I | A | T | L | K | N | V | Y | C | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
K | A | A | Q | L | V | N | A | L | Y | T | I | F | C | A |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |  |  | T | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
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