Job Description P77295 Confidence 96.84% Date Wed Jan 25 15:21:10 GMT 2012 Rank 172 Aligned Residues 91 % Identity 20% Template c2bgcA_ PDB info PDB header:transcription Chain: A: PDB Molecule:prfa; PDBTitle: prfa-g145s, a constitutive active mutant of the2 transcriptional regulator in l.monocytogenes Resolution 2.3 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.																	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		L	A	Q	L	Q	A	S	A	E	Q	A	A	A	L	L	K	A	M	.	S	H	P	K	R	L	L	I	L	C	M	L	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	G	T	S	A	G	E	L	T	R	I	T	G	L	S	A	S	A	.	T	S	Q	H	L	A	R	M	R	D	E
Query Conservation																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		F	Q	T	L	Q	K	Q	V	S	Y	S	L	A	K	F	N	D	F	S	I	N	G	K	L	G	S	I	C	S	Q	L	L	I	L	T	Y	V	Y	G	K	E	T	P	D	G	I	K	I	T	L	D	N	L	T	M	Q	E	L	G	Y	S	S	G	I	A	H	S	S	A	V	S	R	I	I	S	K	L	K	Q	E
Template Known Secondary structure																					T	T																						T	T							S											T	T																	T
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	I	D	S	Q	R	D	A	Q	R	I	L	Y	S	I	K	N	E	A	V	N	A	I	I	A	T	L	K	N	V	Y
Query Conservation
Alig confidence										.	.	.
Template Conservation										.	.	.
Template Sequence		K	V	I	V	Y	K	N	S	.	.	.	C	F	Y	V	Q	N	L	D	Y	L	K	R	Y	A	P	K	L	D	E	W	F
Template Known Secondary structure		T	S					T	T	.	.	.					S
Template Predicted Secondary structure										.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions